miRBase entry: ptr-mir-331

Stem-loop ptr-mir-331


Accession
MI0008622
Description
Pan troglodytes ptr-mir-331 precursor miRNA
Gene family
MIPF0000199; mir-331


Sequence

aguuugguuuuguuuggguuuguucuagguauggucccagggaucccagaucaaaccagGCCCCUGGGCCUAUCCUAGAAccaaccuaagcuc
...........(((((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).)))))))))..

Structure
aguuugguuuu         u        u    u       auc  agau 
           guuuggguu guucuagg augg cccaggg   cc    c
           ||||||||| |||||||| |||| |||||||   ||    a
           cgaauccaa cAAGAUCC UAUC GGGUCCC   Gg    a
---------cu         c        -    C       --C  acca 


Annotation confidence Not enough data
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Genome context
chr12: 98075152-98075244 [+]

Database links

Mature ptr-miR-331

Accession MIMAT0008103
Description Pan troglodytes ptr-miR-331 mature miRNA
Sequence 60 - GCCCCUGGGCCUAUCCUAGAA - 80
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70