miRBase entry: ptr-mir-335

Stem-loop ptr-mir-335


Accession
MI0008623
Description
Pan troglodytes ptr-mir-335 precursor miRNA
Gene family
MIPF0000196; mir-335


Sequence

guuuugagcgggggUCAAGAGCAAUAACGAAAAAUGUuugucauaaaccguuuuucauuauugcuccugaccuccucucauuugcuauauuca
....((((.((((((((.(((((((((.((((((((.((......)).)))))))).))))))))).)))))))).)))).............

Structure
---------guuu    c        A         C        U  gu 
             ugag gggggUCA GAGCAAUAA GAAAAAUG uu  c
             |||| |||||||| ||||||||| |||||||| ||   
             acuc ccuccagu cucguuauu cuuuuugc aa  a
acuuauaucguuu    u        c         a        c  au 


Annotation confidence Not enough data
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Genome context
chr7: 135040242-135040334 [+]

Database links

Mature ptr-miR-335

Accession MIMAT0008104
Description Pan troglodytes ptr-miR-335 mature miRNA
Sequence 15 - UCAAGAGCAAUAACGAAAAAUGU - 37
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70