miRBase entry: ptr-mir-337

Stem-loop ptr-mir-337


Accession
MI0008624
Description
Pan troglodytes ptr-mir-337 precursor miRNA
Gene family
MIPF0000195; mir-337


Sequence

uagucaguaguuggggggugggaacggcuucauacaggaguugaugcacaguuauccagCUCCUAUAUGAUGCCUUUCUUCauccccuucaa
............((((((((((((.(((.(((((.(((((((((((......))).)))))))).))))).))).))).)))))))))....

Structure
uagucaguaguu         -   c   u     c        -   ca 
            ggggggugg gaa ggc ucaua aggaguug aug  c
            ||||||||| ||| ||| ||||| |||||||| |||   
            uccccuaCU CUU CCG AGUAU UCCUCgac uau  a
--------aacu         U   U   U     A        c   ug 


Annotation confidence Not enough data
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Genome context
chr14: 86119486-86119577 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ptr-mir-337
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-337

Accession MIMAT0008105
Description Pan troglodytes ptr-miR-337 mature miRNA
Sequence 60 - CUCCUAUAUGAUGCCUUUCUUC - 81
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70