miRBase entry: ptr-mir-345

Stem-loop ptr-mir-345


Accession
MI0008630
Description
Pan troglodytes ptr-mir-345 precursor miRNA
Gene family
MIPF0000189; mir-345


Sequence

cccaaacccuaggucuGCUGACUCCUAGUCCAGGGCUCgugauggcuggugggcccugaacgaggggucuggaggccuggguuugaauaucgacagc
..(((((((.((((((.(.(((((((.((.((((((((((........)))))))))).)).))))))).).)))))))))))))............

Structure
----------cc       u      G U       A  C          gau 
            caaaccc aggucu C GACUCCU GU CAGGGCUCgu   g
            ||||||| |||||| | ||||||| || ||||||||||    
            guuuggg uccgga g cugggga ca gucccgggug   g
cgacagcuauaa       -      g u       g  a          guc 


Annotation confidence Not enough data
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Genome context
chr14: 85528620-85528716 [+]

Database links

Mature ptr-miR-345

Accession MIMAT0008111
Description Pan troglodytes ptr-miR-345 mature miRNA
Sequence 17 - GCUGACUCCUAGUCCAGGGCUC - 38
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70