miRBase entry: ptr-mir-346

Stem-loop ptr-mir-346


Accession
MI0008631
Description
Pan troglodytes ptr-mir-346 precursor miRNA
Gene family
MIPF0000188; mir-346


Sequence

ggucucuguguugggcgucUGUCUGCCCGCAUGCCUGCCUCUcuguugcucugaaggaggcaggggcugggccugcagcugccugggcagagcg
.(.((((((..((((((.((((..((((((...((((((((.((..........)))))))))).)).))))..)))).)))))).))))))).

Structure
g u      gu      u    CU    -  AUG        U  guug 
 g cucugu  ugggcg cUGU  GCCC GC   CCUGCCUC cu    c
 | ||||||  |||||| ||||  |||| ||   |||||||| ||     
 c gagacg  guccgu gacg  cggg cg   ggacggag ga    u
g -      -g      c    uc    u  --g        -  aguc 


Annotation confidence Not enough data
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Genome context
chr10: 87573011-87573104 [-]

Database links

Mature ptr-miR-346

Accession MIMAT0008112
Description Pan troglodytes ptr-miR-346 mature miRNA
Sequence 20 - UGUCUGCCCGCAUGCCUGCCUCU - 42
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70