miRBase entry: ptr-mir-362

Stem-loop ptr-mir-362


Accession
MI0008635
Description
Pan troglodytes ptr-mir-362 precursor miRNA
Gene family
MIPF0000209; mir-362


Sequence

uugaauccuuggaaccuaggugugagugcuauuucagugcAACACACCUAUUCAAGGAUUCAaa
(((((((((((((...((((((((.(((((.....)))))..))))))))))))))))))))).

Structure
-             acc        -a     a 
 uugaauccuugga   uaggugug  gugcu u
 |||||||||||||   ||||||||  ||||| u
 aACUUAGGAACUU   AUCCACAC  cguga u
a             ---        AA     c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 49893724-49893787 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from ptr-mir-362
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-362

Accession MIMAT0008116
Description Pan troglodytes ptr-miR-362 mature miRNA
Sequence 41 - AACACACCUAUUCAAGGAUUCA - 62
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70