miRBase entry: ptr-mir-371

Stem-loop ptr-mir-371


Accession
MI0008641
Description
Pan troglodytes ptr-mir-371 precursor miRNA
Gene family
MIPF0000068; mir-290


Sequence

uggcacucaaacugugggggcacuuucugcucucuggugaAAGUGCCGCCAUCUUUUGAGUGUuac
(((((((((((..((((.(((((((((.(((....)))))))))))).))))..))))))))))).

Structure
-           cu    g         u   c 
 uggcacucaaa  gugg ggcacuuuc gcu u
 |||||||||||  |||| ||||||||| |||  
 auUGUGAGUUU  UACC CCGUGAAag ugg c
c           UC    G         -   u 


Annotation confidence Not enough data
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Genome context
chr19: 56133702-56133767 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptr-mir-371
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-371

Accession MIMAT0008121
Description Pan troglodytes ptr-miR-371 mature miRNA
Sequence 41 - AAGUGCCGCCAUCUUUUGAGUGU - 63
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70