miRBase entry: ptr-mir-372

Stem-loop ptr-mir-372


Accession
MI0008642
Description
Pan troglodytes ptr-mir-372 precursor miRNA
Gene family
MIPF0000068; mir-290


Sequence

ugggccucaaauguggagcacuauucugauguccaaguggAAAGUGCUGCGACAUUUGAGCGUcac
..((((((((((((.(((((((.((((..(.....)..)))))))))).).))))))))).)))..

Structure
ug   -         g -      a    ga g 
  ggc cucaaaugu g agcacu uucu  u u
  ||| ||||||||| | |||||| ||||  | c
  cUG GAGUUUACA C UCGUGA AAgg  a c
ca   C         G G      -    ug a 


Annotation confidence Not enough data
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Genome context
chr19: 56133919-56133984 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptr-mir-372
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-372

Accession MIMAT0008122
Description Pan troglodytes ptr-miR-372 mature miRNA
Sequence 41 - AAAGUGCUGCGACAUUUGAGCGU - 63
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70