miRBase entry: ptr-mir-374a

Stem-loop ptr-mir-374a


Accession
MI0008643
Description
Pan troglodytes ptr-mir-374a precursor miRNA
Gene family
MIPF0000288; mir-374


Sequence

uacaucggccaUUAUAAUACAACCUGAUAAGUGuuauagcacuuaucagauuguauuguaauugucugugu
.((((.(((.((((((((((((.(((((((((((....))))))))))).)))))))))))).))).))))

Structure
u    c   c            C           u 
 acau ggc aUUAUAAUACAA CUGAUAAGUGu a
 |||| ||| |||||||||||| |||||||||||  
 ugug cug uaauguuauguu gacuauucacg u
-    u   u            a           a 


Annotation confidence Not enough data
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Genome context
chrX: 73670202-73670272 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-374a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-374a

Accession MIMAT0008123
Description Pan troglodytes ptr-miR-374a mature miRNA
Sequence 12 - UUAUAAUACAACCUGAUAAGUG - 33
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70