miRBase entry: ptr-mir-374b

Stem-loop ptr-mir-374b


Accession
MI0008644
Description
Pan troglodytes ptr-mir-374b precursor miRNA
Gene family
MIPF0000288; mir-374


Sequence

acucggauggAUAUAAUACAACCUGCUAAGUGuccuagcacuuagcagguuguauuaucauuguccguguc
((.(((((((..(((((((((((((((((((((....)))))))))))))))))))))..))))))).)).

Structure
-  u       AU                     c 
 ac cggaugg  AUAAUACAACCUGCUAAGUGu c
 || |||||||  |||||||||||||||||||||  
 ug gccuguu  uauuauguuggacgauucacg u
c  u       ac                     a 


Annotation confidence Not enough data
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Genome context
chrX: 73598171-73598241 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-374b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-374b

Accession MIMAT0008124
Description Pan troglodytes ptr-miR-374b mature miRNA
Sequence 11 - AUAUAAUACAACCUGCUAAGUG - 32
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70