miRBase entry: ptr-mir-376c

Stem-loop ptr-mir-376c


Accession
MI0008649
Description
Pan troglodytes ptr-mir-376c precursor miRNA
Gene family
MIPF0000091; mir-368


Sequence

aaagguggauauuccuucuauguuuauguuauuuaugguuaAACAUAGAGGAAAUUCCACGUuuu
(((.(((((..(((((.(((((((((.............))))))))))))))..))))).))).

Structure
-   g     ua     u         uguua 
 aaa gugga  uuccu cuauguuua     u
 ||| |||||  ||||| |||||||||     u
 uuU CACCU  AAGGA GAUACAAau     u
u   G     UA     -         uggua 


Annotation confidence Not enough data
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Genome context
chr14: 86287939-86288003 [+]
Clustered miRNAs
16 other miRNAs are < 10 kb from ptr-mir-376c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-376c

Accession MIMAT0008128
Description Pan troglodytes ptr-miR-376c mature miRNA
Sequence 42 - AACAUAGAGGAAAUUCCACGU - 62
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70