miRBase entry: ptr-mir-378a

Stem-loop ptr-mir-378a


Accession
MI0008651
Description
Pan troglodytes ptr-mir-378a precursor miRNA
Gene family
MIPF0000168; mir-378


Sequence

gggcuccugacuccagguccuguguguuaccuagaaauagcACUGGACUUGGAGUCAGAAGGccu
((.((.((((((((((((((.((((..(........)..)))).)))))))))))))).)).)).

Structure
-  g  c              u    gu acc 
 gg cu cugacuccaggucc gugu  u   u
 || || |||||||||||||| ||||  |    
 cc GA GACUGAGGUUCAGG CAcg  a   a
u  G  A              U    au aag 


Annotation confidence Not enough data
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Genome context
chr5: 149930259-149930323 [+]

Database links

Mature ptr-miR-378a

Accession MIMAT0008130
Description Pan troglodytes ptr-miR-378a mature miRNA
Sequence 42 - ACUGGACUUGGAGUCAGAAGG - 62
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70