Stem-loop sequence ptr-mir-409

AccessionMI0008657 (change log)
DescriptionPan troglodytes miR-409 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop
   -     u  gg   a    ac         -    - auc 
5'  gguac cg  gag gguu  ccgagcaac uuug c   u
    ||||| ||  ||| ||||  ||||||||| |||| |    
3'  cuaug gc  uuc ccaa  ggcucguug aagc g   g
   a     -  uu   c    gu         u    a cag 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chr14: 86313550-86313627 [+]
sense
ENSPTRT00000054494 ; ptr-mir-409-201; exon 1
Clustered miRNAs
< 10kb from ptr-mir-409
ptr-mir-485chr14: 86303654-86303725 [+]
ptr-mir-453chr14: 86304425-86304503 [+]
ptr-mir-154chr14: 86308003-86308086 [+]
ptr-mir-496chr14: 86308822-86308922 [+]
ptr-mir-377chr14: 86310299-86310366 [+]
ptr-mir-409chr14: 86313550-86313627 [+]
ptr-mir-412chr14: 86313697-86313786 [+]
ptr-mir-369chr14: 86313848-86313916 [+]
ptr-mir-410chr14: 86314162-86314240 [+]
ptr-mir-656chr14: 86314977-86315053 [+]
Database links

Mature sequence ptr-miR-409

Accession MIMAT0008136
Sequence

46 - 

gaauguugcucggugaaccccu

 - 67

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Evidence by similarity; MI0001735
Predicted targets

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).