miRBase entry: ptr-mir-421

Stem-loop ptr-mir-421


Accession
MI0008661
Description
Pan troglodytes ptr-mir-421 precursor miRNA
Gene family
MIPF0000098; mir-95


Sequence

gcacauuguaggccucauuaaauguuuguugaaugaaaaaaugaaucAUCAACAGACAUUAAUUGGGCGCcugcucugugaucu
.((((..((((((((((...((((((((((((.(((.........)))))))))))))))...)))).))))))..))))....

Structure
---g    uu      -    uua            a   aaa 
    caca  guaggc cuca   aauguuuguuga uga   a
    ||||  |||||| ||||   |||||||||||| |||   a
    gugu  cgucCG GGGU   UUACAGACAACU Acu   u
ucua    cu      C    UAA            -   aag 


Annotation confidence Not enough data
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Genome context
chrX: 73598001-73598084 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-421
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-421

Accession MIMAT0008140
Description Pan troglodytes ptr-miR-421 mature miRNA
Sequence 48 - AUCAACAGACAUUAAUUGGGCGC - 70
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70