miRBase entry: ptr-mir-422a

Stem-loop ptr-mir-422a


Accession
MI0008662
Description
Pan troglodytes ptr-mir-422a precursor miRNA
Gene family
MIPF0000548; mir-422


Sequence

gagagaagcACUGGACUUAGGGUCAGAAGGCcugagucucucugcugcagaugggcucucugucccugagccaagcuuuguccucccug
(((.(((((..(((.(((((((.((((.(((((..(((((......).))))))))).)))).)))))))))).)))))...)))....

Structure
----   --a     AC   A       U    A     ga    - uc 
    gag   gaagc  UGG CUUAGGG CAGA GGCcu  gucu c  u
    |||   |||||  ||| ||||||| |||| |||||  |||| |   
    cuc   uuucg  acc gaguccc gucu ucggg  uaga g  g
gucc   cug     -a   -       u    c     --    c uc 


Annotation confidence Not enough data
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Genome context
chr15: 44709379-44709467 [-]

Database links

Mature ptr-miR-422a

Accession MIMAT0008141
Description Pan troglodytes ptr-miR-422a mature miRNA
Sequence 10 - ACUGGACUUAGGGUCAGAAGGC - 31
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70