miRBase entry: ptr-mir-432

Stem-loop ptr-mir-432


Accession
MI0008667
Description
Pan troglodytes ptr-mir-432 precursor miRNA
Gene family
MIPF0000211; mir-432


Sequence

gacuccuccaggUCUUGGAGUAGGUCAUUGGGUGGauccucuauuuccuuacgugggccacuggauggcuccuccaugucuuggaguagauca
((((.(((((((.(.(((((..(((((((.(((((.(((.(((......)).).)))))))).))))))).))))).).))))))).)).)).

Structure
-  -  c       U U     UA       G     a   u -  uu 
 ga cu cuccagg C UGGAG  GGUCAUU GGUGG ucc c ua  u
 || || ||||||| | |||||  ||||||| ||||| ||| | ||   
 cu ga gagguuc g accuc  ucgguag ucacc ggg g au  c
a  a  u       u u     -c       g     -   u c  uc 


Annotation confidence Not enough data
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Genome context
chr14: 86129447-86129539 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from ptr-mir-432
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-432

Accession MIMAT0008146
Description Pan troglodytes ptr-miR-432 mature miRNA
Sequence 13 - UCUUGGAGUAGGUCAUUGGGUGG - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70