miRBase entry: ptr-mir-448

Stem-loop ptr-mir-448


Accession
MI0008669
Description
Pan troglodytes ptr-mir-448 precursor miRNA
Gene family
MIPF0000149; mir-448


Sequence

ccgggagguugaacauccugcauagugcugccaggaaaucccuauuucauauaagagggggcuggcuggUUGCAUAUGUAGGAUGUCCCAUcucccagcccacuucguca
..(((((((.(.((((((((((((.(((.(((((....(((((.((......)).))))).....))))).))))))))))))))).).)))))))..............

Structure
------------cc       u a            g   u     -gaaa     a  uc 
              gggaggu g acauccugcaua ugc gccag     ucccu uu  a
              ||||||| | |||||||||||| ||| |||||     ||||| ||   
              cccucUA C UGUAGGAUGUAU ACG Ugguc     gggga aa  u
acugcuucacccga       C C            -   U     ggucg     g  ua 


Annotation confidence Not enough data
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Genome context
chrX: 114520716-114520825 [+]

Database links

Mature ptr-miR-448

Accession MIMAT0008148
Description Pan troglodytes ptr-miR-448 mature miRNA
Sequence 70 - UUGCAUAUGUAGGAUGUCCCAU - 91
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70