miRBase entry: ptr-mir-450b

Stem-loop ptr-mir-450b


Accession
MI0008674
Description
Pan troglodytes ptr-mir-450b precursor miRNA
Gene family
MIPF0000128; mir-450


Sequence

gcagaauuauuuuugcaauauguuccugaauauguaauauaaguguaUUGGGAUCAUUUUGCAUCCAUAguuuugua
((((((((((...(((((.(((.((((((((((.........)))).)))))).))).)))))...)))))))))).

Structure
-          uuu     u   u      -    gua 
 gcagaauuau   ugcaa aug uccuga auau   a
 ||||||||||   ||||| ||| |||||| ||||   u
 uguuuugAUA   ACGUU UAC AGGGUU ugug   a
a          CCU     U   U      a    aau 


Annotation confidence Not enough data
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Genome context
chrX: 134410842-134410918 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from ptr-mir-450b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-450b

Accession MIMAT0008152
Description Pan troglodytes ptr-miR-450b mature miRNA
Sequence 48 - UUGGGAUCAUUUUGCAUCCAUA - 69
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70