miRBase entry: ptr-mir-452

Stem-loop ptr-mir-452


Accession
MI0008676
Description
Pan troglodytes ptr-mir-452 precursor miRNA
Gene family
MIPF0000287; mir-452


Sequence

gcuaagcacuuacAACUGUUUGCAGAGGAAACUGAgacuuuguaacuaugucucagucucaucugcaaagaaguaagugcuuug
...((((((((((...(.((((((((.((.((((((((...........)))))))).)).)))))))).).))))))))))..

Structure
gcu          AAC G        G  A        uuug 
   aagcacuuac   U UUUGCAGA GA ACUGAgac    u
   ||||||||||   | |||||||| || ||||||||    a
   uucgugaaug   a aaacgucu cu ugacucug    a
-gu          --a g        a  c        uauc 


Annotation confidence Not enough data
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Genome context
chrX: 151682943-151683026 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-452
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-452

Accession MIMAT0008154
Description Pan troglodytes ptr-miR-452 mature miRNA
Sequence 14 - AACUGUUUGCAGAGGAAACUGA - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70