miRBase entry: ptr-mir-455

Stem-loop ptr-mir-455


Accession
MI0008679
Description
Pan troglodytes ptr-mir-455 precursor miRNA
Gene family
MIPF0000129; mir-455


Sequence

cccuggcgugaggguaugugccuuuggacuacaucguggaagccagcaccauGCAGUCCAUGGGCAUAUACACuugccucaaggccuaugucauc
....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..))).........

Structure
-----cccu   -g     -----          u      a   c   gaa 
         ggc  ugagg     guaugugccu uggacu cau gug   g
         |||  |||||     |||||||||| |||||| ||| |||    
         ccg  acucc     CAUAUACGGG ACCUGA Gua cac   c
cuacuguau   ga     guuCA          U      C   c   gac 


Annotation confidence Not enough data
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Genome context
chr9: 92164401-92164495 [+]

Database links

Mature ptr-miR-455

Accession MIMAT0008157
Description Pan troglodytes ptr-miR-455 mature miRNA
Sequence 53 - GCAGUCCAUGGGCAUAUACAC - 73
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70