miRBase entry: ptr-mir-488

Stem-loop ptr-mir-488


Accession
MI0008685
Description
Pan troglodytes ptr-mir-488 precursor miRNA
Gene family
MIPF0000318; mir-488


Sequence

gagaaucaucucucccagauaauggcacucucaaacaaguuuucaaauuguUUGAAAGGCUAUUUCUUGGUCagaugacucu
.(((.((((((..((.(((.((((((.((.((((((((.........)))))))).))))))))))).))..)))))).)))

Structure
g   a      cu  c   u      a  c        guu 
 aga ucaucu  cc aga aauggc cu ucaaacaa   u
 ||| ||||||  || ||| |||||| || ||||||||   u
 ucu aguaga  GG UCU UUAUCG GA AGUUuguu   c
-   c      CU  U   -      -  A        aaa 


Annotation confidence Not enough data
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Genome context
chr1: 155552474-155552555 [-]

Database links

Mature ptr-miR-488

Accession MIMAT0008163
Description Pan troglodytes ptr-miR-488 mature miRNA
Sequence 52 - UUGAAAGGCUAUUUCUUGGUC - 72
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70