Stem-loop sequence ptr-mir-490

Accession MI0008687
Description Pan troglodytes miR-490 stem-loop
Gene family MIPF0000229; mir-490
Stem-loop 
-     -cc      g    -   aguucauu        c      --         g   caa   u 
 ggagg   uugcug uuug gaa        guucgaca caugga  ucuccaggu ggu   guu a
 |||||   |||||| |||| |||        |||||||| ||||||  ||||||||| |||   |||  
 ccuuc   ggcgac gaac cuu        cgaguugu guaccu  ggaggucca cca   uag g
a     aca      -    a   ------gu        c      ca         a   -cg   a
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Genome context
Coordinates (PanTro2.1.4) Overlapping transcripts
7: 138382916-138383042 [+]
sense
ENSPTRT00000061742 ; ACM2_PANTR; intron 2
ENSPTRT00000036564 ; ACM2_PANTR; intron 2
ENSPTRT00000061742 ; ACM2_PANTR; intron 2
ENSPTRT00000061742 ; ACM2_PANTR; intron 2
Database links
  • ENTREZGENE: 100316178;MIR490

Mature sequence ptr-miR-490

Accession MIMAT0008165
Sequence

75 -  

caaccuggaggacuccaugcug

 - 96

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Evidence by similarity; MI0003125

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).