miRBase entry: ptr-mir-490

Stem-loop ptr-mir-490


Accession
MI0008687
Description
Pan troglodytes ptr-mir-490 precursor miRNA
Gene family
MIPF0000229; mir-490


Sequence

ggaggccuugcugguuuggaaaguucauuguucgacaccauggaucuccaggugggucaaguuuagagaugcacCAACCUGGAGGACUCCAUGCUGuugagcuguucacaagcagcggacacuucca
(((((..((((((.(((((((........((((((((.(((((((((((((((.(((((..........)).))).)))))))))..)))))).))))))))..))).))))))))))...))))).

Structure
-     -cc      g    -   aguucauu        c      --         g   -  aguu 
 ggagg   uugcug uuug gaa        guucgaca caugga  ucuccaggu ggu ca    u
 |||||   |||||| |||| |||        |||||||| ||||||  ||||||||| ||| ||     
 ccuuc   ggcgac gaac cuu        cgaguuGU GUACCU  GGAGGUCCA Cca gu    a
a     aca      -    a   ------gu        C      CA         A   c  agag 


Annotation confidence Not enough data
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Genome context
chr7: 141461802-141461928 [+]

Database links

Mature ptr-miR-490

Accession MIMAT0008165
Description Pan troglodytes ptr-miR-490 mature miRNA
Sequence 75 - CAACCUGGAGGACUCCAUGCUG - 96
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70