miRBase entry: ptr-mir-495

Stem-loop ptr-mir-495


Accession
MI0008691
Description
Pan troglodytes ptr-mir-495 precursor miRNA
Gene family
MIPF0000110; mir-329


Sequence

gguaccugaaaagaaguugcccauguuauuuucgcuuuauaugugacgAAACAAACAUGGUGCACUUCUUuuucgguauca
((((((.((((((((((.(((((((((..((((((.........).)))))..))))))).)))))))))))).)))))).

Structure
-      u          u  -       au     - uuu 
 gguacc gaaaagaagu gc ccauguu  uuucg c   a
 |||||| |||||||||| || |||||||  ||||| |   u
 cuaugg uuuUUCUUCA CG GGUACAA  AAAgc g   a
a      c          -  U       AC     a ugu 


Annotation confidence Not enough data
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Genome context
chr14: 86282275-86282355 [+]
Clustered miRNAs
16 other miRNAs are < 10 kb from ptr-mir-495
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-495

Accession MIMAT0008169
Description Pan troglodytes ptr-miR-495 mature miRNA
Sequence 49 - AAACAAACAUGGUGCACUUCUU - 70
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70