Stem-loop sequence ptr-mir-499

Accession

MI0008694 (change log)

Description

Pan troglodytes miR-499 stem-loop

Gene family

MIPF0000173; mir-499

Literature search

1 open access papers mention ptr-mir-499
(1 sentences)

Stem-loop

   -        ccugu  cuu   -    c   u  ua        a          acucc 
5'  cccugucc     gc   ggg cggg agc gu  agacuugc gugauguuua     u
    ||||||||     ||   ||| |||| ||| ||  |||||||| ||||||||||     c
3'  gggacggg     cg   ccc gccc ucg cg  ucugaacg cacuacaagu     u
   u        uccgu  cau   u    u   u  ug        a          gcacc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Pan_tro3.0; GCA_000001515.5): chr20: 36436961-36437081 [+]
• Overlapping transcripts:

  sense

  ENSPTRT00000024953 ; MYH7B-201; intron 21

Database links

• EntrezGene:MIR499
• miRBase Tracker:MI0008694

Mature sequence ptr-miR-499

• Accession: MIMAT0008172
• Sequence: 69 - aacaucacagcaagucugugcu - 90
• Evidence: by similarity; MI0003183
• Predicted targets:
  • TargetScanVert:ptr-miR-499

References

1. PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).