miRBase entry: ptr-mir-511

Stem-loop ptr-mir-511


Accession
MI0008701
Description
Pan troglodytes ptr-mir-511 precursor miRNA
Gene family
MIPF0000807; mir-511


Sequence

aauagacacccaucGUGUCUUUUGCUCUGCAGUCAguaaauauuuuguugugaauguguagcaaaagacagaauggugguccauug
....(((..((((..(((((((((((.((((.(((...((....))....))).)))).)))))))))))..))))..))).....

Structure
-aaua   ac    cG           C    G   -gua  u 
     gac  ccau  UGUCUUUUGCU UGCA UCA    aa a
     |||  ||||  ||||||||||| |||| |||    ||  
     cug  ggua  acagaaaacga gugu agu    uu u
guuac   gu    ag           u    a   guug  u 


Annotation confidence Not enough data
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Genome context
chr10: 18663492-18663577 [+]

Database links

Mature ptr-miR-511

Accession MIMAT0008179
Description Pan troglodytes ptr-miR-511 mature miRNA
Sequence 15 - GUGUCUUUUGCUCUGCAGUCA - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70