Stem-loop sequence ptr-mir-518c

AccessionMI0008714 (change log)
DescriptionPan troglodytes miR-518c stem-loop
Gene family MIPF0000020; mir-515
Stem-loop
   caagaaga     u        u              a   uc    g  u 
5'         ucuca gcugugac cucuggagggaagc cuu  uguu uc g
           ||||| |||||||| |||||||||||||| |||  |||| || a
3'         agagu uggcauug gagauuucucuucg gaa  acaa ag a
   ---cgaaa     u        u              c   --    a  a 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chr19: 56056864-56056963 [+]
intergenic
Clustered miRNAs
< 10kb from ptr-mir-518c
ptr-mir-518fchr19: 56048137-56048222 [+]
ptr-mir-520bchr19: 56049349-56049408 [+]
ptr-mir-518bchr19: 56050864-56050945 [+]
ptr-mir-526a-1chr19: 56054378-56054461 [+]
ptr-mir-520cchr19: 56055581-56055666 [+]
ptr-mir-518cchr19: 56056864-56056963 [+]
ptr-mir-524chr19: 56057933-56058018 [+]
ptr-mir-517achr19: 56059195-56059280 [+]
ptr-mir-519dchr19: 56060274-56060360 [+]
ptr-mir-521-2chr19: 56063505-56063590 [+]
Database links

Mature sequence ptr-miR-518c

Accession MIMAT0008188
Sequence

61 - 

caaagcgcuucucuuuagagugu

 - 83

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Evidence by similarity; MI0003159
Predicted targets

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).