Stem-loop sequence ptr-mir-520h

AccessionMI0008730 (change log)
DescriptionPan troglodytes miR-520h stem-loop
Gene family MIPF0000020; mir-515
Stem-loop
   -    cgcu     c         -        uc     guugu 
5'  ccca    gugac cucuagagg aagcacuu  uguuu     c
    ||||    ||||| ||||||||| ||||||||  |||||     u
3'  gggu    cauug gagauuucc uucgugaa  acaaa     g
   a    uuuc     u         c        --     aaaga 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chr19: 56089945-56090033 [+]
intergenic
Clustered miRNAs
< 10kb from ptr-mir-520h
ptr-mir-518dchr19: 56082272-56082357 [+]
ptr-mir-516b-1chr19: 56084257-56084345 [+]
ptr-mir-518achr19: 56086733-56086818 [+]
ptr-mir-517b-2chr19: 56088737-56088802 [+]
ptr-mir-520hchr19: 56089945-56090033 [+]
ptr-mir-521-1chr19: 56096062-56096147 [+]
ptr-mir-522chr19: 56098628-56098713 [+]
ptr-mir-519fchr19: 56099801-56099908 [+]
Database links

Mature sequence ptr-miR-520h

Accession MIMAT0008204
Sequence

54 - 

acaaagugcuucccuuuagagugu

 - 77

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Evidence by similarity; MI0003166
Predicted targets

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).