miRBase entry: ptr-mir-522

Stem-loop ptr-mir-522


Accession
MI0008733
Description
Pan troglodytes ptr-mir-522 precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

cucaggcugugucccucuagagggaagcgcuuucuguugucugaaagaaaagAAAAUGGUUCCCUUUAGAGUGUuacgcuuugaga
(((((((.(((.(.((((((((((((.((.(((((....(((...)))..))))).)).)))))))))))).).))))).))))).

Structure
-     -  u   u c            g  c     guug   g 
 cucag gc gug c cucuagagggaa cg uuucu    ucu  
 ||||| || ||| | |||||||||||| || |||||    ||| a
 gaguu cg cau G GAGAUUUCCCUU GU AAAga    aga  
a     u  -   U U            G  A     --aa   a 


Annotation confidence Not enough data
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Genome context
chr19: 56098628-56098713 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from ptr-mir-522
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-522

Accession MIMAT0008206
Description Pan troglodytes ptr-miR-522 mature miRNA
Sequence 53 - AAAAUGGUUCCCUUUAGAGUGU - 74
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70