Stem-loop sequence ptr-mir-527

Accession MI0008740
Description Pan troglodytes miR-527 stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
-            c  ug           c      guug  u 
 cucaggcuguga uc  caaagggaagc cuuucu    uc a
 |||||||||||| ||  ||||||||||| ||||||    || a
 gaguuuggcauu ag  guuucccuucg gaaaga    ag a
a            a  ug           u      --aa  a
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Genome context
Coordinates (PanTro2.1.4) Overlapping transcripts
19: 58663052-58663137 [+]
intergenic
Clustered miRNAs
< 10kb from ptr-mir-527
ptr-mir-521-1 19: 58656954-58657039 [+]
ptr-mir-522 19: 58660239-58660324 [+]
ptr-mir-527 19: 58663052-58663137 [+]
ptr-mir-516a-1 19: 58665767-58665855 [+]
ptr-mir-516a-2 19: 58670166-58670254 [+]
ptr-mir-519a 19: 58671376-58671461 [+]
Database links
  • ENTREZGENE: 100316482;MIR527

Mature sequence ptr-miR-527

Accession MIMAT0008212
Sequence

15 -  

cugcaaagggaagcccuuuc

 - 34

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Evidence by similarity; MI0003179

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).