miRBase entry: ptr-mir-550-2

Stem-loop ptr-mir-550-2


Accession
MI0008766
Description
Pan troglodytes ptr-mir-550-2 precursor miRNA
Gene family
MIPF0000334; mir-550


Sequence

gaugcuuugcuggcuggugcAGUGCCUGAGGGAGUAAGAGCCCuguuguuguaagauagugucuuacucccucaggcacaucuccaacaagucucu
((.((((.(.(((..(((...((((((((((((((((((.(.(((((.......))))).)))))))))))))))))))))).))).))))).)).

Structure
-  u    u c   cu   gcA                  G C     gu 
 ga gcuu g ugg  ggu   GUGCCUGAGGGAGUAAGA C Cuguu  u
 || |||| | |||  |||   |||||||||||||||||| | |||||  g
 cu ugaa c acc  cua   cacggacucccucauucu g gauag  u
u  c    - a   -u   ---                  - u     aa 


Annotation confidence Not enough data
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Genome context
chr7: 29454666-29454761 [+]

Database links

Mature ptr-miR-550

Accession MIMAT0008230
Description Pan troglodytes ptr-miR-550 mature miRNA
Sequence 21 - AGUGCCUGAGGGAGUAAGAGCCC - 43
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70