miRBase entry: ptr-mir-550-3

Stem-loop ptr-mir-550-3


Accession
MI0008767
Description
Pan troglodytes ptr-mir-550-3 precursor miRNA
Gene family
MIPF0000334; mir-550


Sequence

gaugcuuugcuggcuggugcAGUGCCUGAGGGAGUAAGAGCCCuguuguuguaagauagugucuuacucccucaggcacaucuccaacgagucucu
........(((.(.(((.(..((((((((((((((((((.(.(((((.......))))).)))))))))))))))))))..).))).).)))....

Structure
gaugcuuu   g c   u cA                  G C     gu 
        gcu g ugg g  GUGCCUGAGGGAGUAAGA C Cuguu  u
        ||| | ||| |  |||||||||||||||||| | |||||  g
        uga c acc c  cacggacucccucauucu g gauag  u
----ucuc   g a   u ua                  - u     aa 


Annotation confidence Not enough data
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Genome context
chr7: 31884763-31884858 [+]

Database links

Mature ptr-miR-550

Accession MIMAT0008230
Description Pan troglodytes ptr-miR-550 mature miRNA
Sequence 21 - AGUGCCUGAGGGAGUAAGAGCCC - 43
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70