miRBase entry: ptr-mir-551a

Stem-loop ptr-mir-551a


Accession
MI0008768
Description
Pan troglodytes ptr-mir-551a precursor miRNA
Gene family
MIPF0000360; mir-551


Sequence

ggggacugccgggugacccuggaaauccagaguggguggggccugucugaccguuucuagGCGACCCACUCUUGGUUUCCAggguugcccuggaa
((......))(((((((((((((((((.(((((((((...(((((............))))).))))))))).))))))))))))))))).....

Structure
ggggacugcc                 c         ggg     ucuga 
          gggugacccuggaaauc agagugggu   gccug     c
          ||||||||||||||||| |||||||||   |||||      
          cccguugggACCUUUGG UCUCACCCA   CGgau     c
-----aaggu                 U         --G     cuuug 


Annotation confidence Not enough data
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Genome context
chr1: 2700886-2700980 [-]

Database links

Mature ptr-miR-551a

Accession MIMAT0008231
Description Pan troglodytes ptr-miR-551a mature miRNA
Sequence 61 - GCGACCCACUCUUGGUUUCCA - 81
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70