miRBase entry: ptr-mir-552

Stem-loop ptr-mir-552


Accession
MI0008770
Description
Pan troglodytes ptr-mir-552 precursor miRNA
Gene family
MIPF0000501; mir-552


Sequence

aaccauucaaauauaccacaguuuguuuaaccuuuugccuguugguugaagaugccuuucAACAGGUGACUGGUUAGACAAacugugguauauac
..........((((((((((((((((((((((..((((((((((...((((....))))))))))))))..))))))))))))))))))))))..

Structure
aaccauucaa                      uu          guu    a 
          auauaccacaguuuguuuaacc  uugccuguug   gaag u
          ||||||||||||||||||||||  ||||||||||   ||||  
          uauauggugucaAACAGAUUGG  AGUGGACAAc   uuuc g
--------ca                      UC          ---    c 


Annotation confidence Not enough data
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Genome context
chr1: 33991382-33991476 [-]

Database links

Mature ptr-miR-552

Accession MIMAT0008233
Description Pan troglodytes ptr-miR-552 mature miRNA
Sequence 61 - AACAGGUGACUGGUUAGACAA - 81
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70