miRBase entry: ptr-mir-556

Stem-loop ptr-mir-556


Accession
MI0008774
Description
Pan troglodytes ptr-mir-556 precursor miRNA
Gene family
MIPF0000475; mir-556


Sequence

auaguaauaagaaagaugagcucauuguaauaugagcuucauuuauacauuucAUAUUACCAUUAGCUCAUCUUUuuuauuacuaccuucaaca
.(((((((((((((((((((((.((.((((((((((..............)))))))))).)).))))))))))))))))))))).........

Structure
--------a                     c  u          cuucau 
         uaguaauaagaaagaugagcu au guaauaugag      u
         ||||||||||||||||||||| || ||||||||||       
         aucauuauuuUUUCUACUCGA UA CAUUAUAcuu      u
acaacuucc                     U  C          uacaua 


Annotation confidence Not enough data
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Genome context
chr1: 140438995-140439088 [+]

Database links

Mature ptr-miR-556

Accession MIMAT0008237
Description Pan troglodytes ptr-miR-556 mature miRNA
Sequence 54 - AUAUUACCAUUAGCUCAUCUUU - 75
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70