miRBase entry: ptr-mir-559

Stem-loop ptr-mir-559


Accession
MI0008777
Description
Pan troglodytes ptr-mir-559 precursor miRNA
Gene family
MIPF0000656; mir-559


Sequence

cuccaguaacaucuUAAAGUAAAUAUGCACCAAAAuuacuuuugguaaauauaguuuuggugcauauuuacuuuaggauguuacuggagcuccca
((((((((((((((((((((((((((((((((((((((..(((...)))..))))))))))))))))))))))))))))))))))))))......

Structure
------                                      cu   g 
      cuccaguaacaucuUAAAGUAAAUAUGCACCAAAAuua  uuu  
      ||||||||||||||||||||||||||||||||||||||  ||| g
      gaggucauuguaggauuucauuuauacgugguuuugau  aaa  
acccuc                                      au   u 


Annotation confidence Not enough data
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Genome context
chr2A: 48459313-48459407 [+]

Database links

Mature ptr-miR-559

Accession MIMAT0008240
Description Pan troglodytes ptr-miR-559 mature miRNA
Sequence 15 - UAAAGUAAAUAUGCACCAAAA - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70