miRBase entry: ptr-mir-561

Stem-loop ptr-mir-561


Accession
MI0008778
Description
Pan troglodytes ptr-mir-561 precursor miRNA
Gene family
MIPF0000623; mir-561


Sequence

uucauccaccaguccuccaggaacagcaaggaucuuaaacuuugccagagcuacaaaggcAAAGUUUAAGAUCCUUGAAGUUccugggggaaccau
............((((((((((((..((((((((((((((((((((...........))))))))))))))))))))..)))))))))))).....

Structure
uucauccaccag            ag                    agag 
            uccuccaggaac  caaggaucuuaaacuuugcc    c
            ||||||||||||  ||||||||||||||||||||    u
            aggggguccUUG  GUUCCUAGAAUUUGAAAcgg    a
-------uacca            AA                    aaac 


Annotation confidence Not enough data
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Genome context
chr2B: 78826498-78826593 [+]

Database links

Mature ptr-miR-561

Accession MIMAT0008241
Description Pan troglodytes ptr-miR-561 mature miRNA
Sequence 61 - AAAGUUUAAGAUCCUUGAAGUU - 82
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70