miRBase entry: ptr-mir-568

Stem-loop ptr-mir-568


Accession
MI0008783
Description
Pan troglodytes ptr-mir-568 precursor miRNA
Gene family
MIPF0000408; mir-568


Sequence

gauauacacuauauuAUGUAUAAAUGUAUACACACuuccuauauguauccacauauauauaguguauauauuauacauguauagguguguauau
.(((((((((((((.((((((((.(((((((((......(((((((....)))))))....)))))))))))))))))))))).))))))))..

Structure
-g        -     u        A         ACuucc       a 
  auauacac uauau AUGUAUAA UGUAUACAC      uauaugu u
  |||||||| ||||| |||||||| |||||||||      |||||||  
  uaugugug auaug uacauauu auauaugug      auauaca c
ua        g     -        -         --auau       c 


Annotation confidence Not enough data
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Genome context
chr3: 117428874-117428967 [-]

Database links

Mature ptr-miR-568

Accession MIMAT0008246
Description Pan troglodytes ptr-miR-568 mature miRNA
Sequence 16 - AUGUAUAAAUGUAUACACAC - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70