miRBase entry: ptr-mir-569

Stem-loop ptr-mir-569


Accession
MI0008784
Description
Pan troglodytes ptr-mir-569 precursor miRNA
Gene family
MIPF0000535; mir-569


Sequence

gguauuguuagauuaauuuugugggacauuaacgacagcaucagaagcaacaucagcuuuAGUUAAUGAAUCCUGGAAAGUuaagugacuuuauu
.(((..((((..((((((((.((((((((((((...(((................)))...)))))))..))))).)))))))).))))..))).

Structure
g   uu    ga        g     --       gac   aucagaa 
 gua  guua  uuaauuuu uggga  cauuaac   agc       g
 |||  ||||  |||||||| |||||  |||||||   |||        
 uau  cagu  aauUGAAA GUCCU  GUAAUUG   ucg       c
u   uu    -g        G     AA       Auu   acuacaa 


Annotation confidence Not enough data
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Genome context
chr3: 174828497-174828591 [-]

Database links

Mature ptr-miR-569

Accession MIMAT0008247
Description Pan troglodytes ptr-miR-569 mature miRNA
Sequence 61 - AGUUAAUGAAUCCUGGAAAGU - 81
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70