miRBase entry: ptr-mir-579

Stem-loop ptr-mir-579


Accession
MI0008789
Description
Pan troglodytes ptr-mir-579 precursor miRNA
Gene family
MIPF0000317; mir-548


Sequence

auauuagguuaaugcaaaaguaaucgcgguuugugccagaugacgauuugaauuaauaaaUUCAUUUGGUAUAAACCGCGAUUauuuuugcaucaac
.......(((.((((((((((((((((((((((((((((((((..(((((......))))))))))))))))))))))))))))))))))))).)))

Structure
auauuag   a                                cg     aa 
       guu augcaaaaguaaucgcgguuugugccagauga  auuug  u
       ||| ||||||||||||||||||||||||||||||||  |||||   
       caa uacguuuuuaUUAGCGCCAAAUAUGGUUUACU  Uaaau  u
-------   c                                --     aa 


Annotation confidence Not enough data
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Genome context
chr5: 81902487-81902583 [+]

Database links

Mature ptr-miR-579

Accession MIMAT0008252
Description Pan troglodytes ptr-miR-579 mature miRNA
Sequence 61 - UUCAUUUGGUAUAAACCGCGAUU - 83
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70