miRBase entry: ptr-mir-582

Stem-loop ptr-mir-582


Accession
MI0008792
Description
Pan troglodytes ptr-mir-582 precursor miRNA
Gene family
MIPF0000417; mir-582


Sequence

ucugugcucuuugauUACAGUUGUUCAACCAGUUACUAaucuaacuaauuguaacugguugaacaacugaacccaaagggugcaaaguagaaacauu
..(((((((((((....(((((((((((((((((((..............)))))))))))))))))))....))))))))))).............

Structure
-----------uc           auUA                   UAaucu 
             ugugcucuuug    CAGUUGUUCAACCAGUUAC      a
             |||||||||||    |||||||||||||||||||       
             acgugggaaac    gucaacaaguuggucaaug      a
uuacaaagaugaa           ccaa                   uuaauc 


Annotation confidence Not enough data
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Genome context
chr5: 54790863-54790959 [+]

Database links

Mature ptr-miR-582

Accession MIMAT0008255
Description Pan troglodytes ptr-miR-582 mature miRNA
Sequence 16 - UACAGUUGUUCAACCAGUUACUA - 38
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70