miRBase entry: ptr-mir-587

Stem-loop ptr-mir-587


Accession
MI0008796
Description
Pan troglodytes ptr-mir-587 precursor miRNA
Gene family
MIPF0000563; mir-587


Sequence

uccuaugcacccucUUUCCAUAGGUGAUGAGUCACagggcucagggaaugugucugcaccugugacucaucaccaguggaaagcccaucccauau
...((((......((((((((.((((((((((((((((...((((.......))))..)))))))))))))))).)))))))).......)))).

Structure
ucc    -cacccu        A                gcu    ga 
   uaug       cUUUCCAU GGUGAUGAGUCACagg   cagg  a
   ||||       |||||||| ||||||||||||||||   ||||  u
   auac       gaaaggug ccacuacucagugucc   gucu  g
--u    ccuaccc        a                -ac    gu 


Annotation confidence Not enough data
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Genome context
chr6: 110228284-110228378 [+]

Database links

Mature ptr-miR-587

Accession MIMAT0008259
Description Pan troglodytes ptr-miR-587 mature miRNA
Sequence 15 - UUUCCAUAGGUGAUGAGUCAC - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70