miRBase entry: ptr-mir-588

Stem-loop ptr-mir-588


Accession
MI0008797
Description
Pan troglodytes ptr-mir-588 precursor miRNA
Gene family
MIPF0000681; mir-588


Sequence

gcuuagguaccaauUUGGCCACAAUGGGUUAGAACacuauuccauuguguucuuacccaccauggccaaaauugggccuaag
.(((((((.((((((((((((...(((((.(((((((.........))))))).)))))...))))).))))))))))))))

Structure
g       a       -     CAA     U       uau 
 cuuaggu ccaauUU GGCCA   UGGGU AGAACac   u
 ||||||| ||||||| |||||   ||||| |||||||   c
 gaauccg gguuaaa ccggu   accca ucuugug   c
-       -       a     acc     u       uua 


Annotation confidence Not enough data
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Genome context
chr6: 130296012-130296093 [+]

Database links

Mature ptr-miR-588

Accession MIMAT0008260
Description Pan troglodytes ptr-miR-588 mature miRNA
Sequence 15 - UUGGCCACAAUGGGUUAGAAC - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70