miRBase entry: ptr-mir-590

Stem-loop ptr-mir-590


Accession
MI0008798
Description
Pan troglodytes ptr-mir-590 precursor miRNA
Gene family
MIPF0000418; mir-590


Sequence

agccagucagaaaugagcuuauucauaaaagugcaguauggugaagucaaucugUAAUUUUAUGUAUAAGCUAGUcucugauugaaacaugcagca
...((((((((.((.(((((((.(((((((.(((((..(((.....)))..))))).))))))).))))))).)).))))))))............

Structure
---------agc        a  g       u       g     ua   u 
            cagucaga au agcuuau cauaaaa ugcag  ugg g
            |||||||| || ||||||| ||||||| |||||  ||| a
            guuagucu UG UCGAAUA GUAUUUU AUguc  acu a
acgacguacaaa        c  A       U       A     ua   g 


Annotation confidence Not enough data
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Genome context
chr7: 75077878-75077973 [-]

Database links

Mature ptr-miR-590

Accession MIMAT0008261
Description Pan troglodytes ptr-miR-590 mature miRNA
Sequence 55 - UAAUUUUAUGUAUAAGCUAGU - 75
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70