miRBase entry: ptr-mir-595

Stem-loop ptr-mir-595


Accession
MI0008802
Description
Pan troglodytes ptr-mir-595 precursor miRNA
Gene family
MIPF0000651; mir-595


Sequence

acggaagccugcacgcauuuaacaccagcacgcucaacguagucuuguaaggaacagguuGAAGUGUGCCGUGGUGUGUCUggaggaagcgccug
..((...(((.((.((.....(((((((((((((((((.(..((((...))))..).)))).)))))))..)))))))).)).))).....))..

Structure
ac  --aag   g  c  auuua      --       -    g ag    g 
  gg     ccu ca gc     acacca  gcacgcu caac u  ucuu  
  ||     ||| || ||     ||||||  ||||||| |||| |  |||| u
  cc     gga gU UG     UGUGGU  CGUGUGA Guug a  agga  
gu  gcgaa   g  C  -----      GC       A    g ca    a 


Annotation confidence Not enough data
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Genome context
chr7: 162238196-162238290 [-]

Database links

Mature ptr-miR-595

Accession MIMAT0008265
Description Pan troglodytes ptr-miR-595 mature miRNA
Sequence 61 - GAAGUGUGCCGUGGUGUGUCU - 81
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70