miRBase entry: ptr-mir-597

Stem-loop ptr-mir-597


Accession
MI0008803
Description
Pan troglodytes ptr-mir-597 precursor miRNA
Gene family
MIPF0000479; mir-597


Sequence

acuuacucuacgugUGUGUCACUCGAUGACCACUGUgaagacaguaaaauguacagugguucucuuguggcucaagcguaauguagaguacugguc
...((((((((((.((((((((..((.(((((((((....(((......)))))))))))).))..)))))....)))..))))))))))......

Structure
---acu          -g   ----     UC  U         gaag   gu 
      uacucuacgu  UGU    GUCAC  GA GACCACUGU    aca  a
      ||||||||||  |||    |||||  || |||||||||    |||   
      augagaugua  gcg    cggug  cu uuggugaca    ugu  a
cugguc          au   aacu     uu  c         ----   aa 


Annotation confidence Not enough data
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Genome context
chr8: 9084501-9084596 [+]

Database links

Mature ptr-miR-597

Accession MIMAT0008266
Description Pan troglodytes ptr-miR-597 mature miRNA
Sequence 15 - UGUGUCACUCGAUGACCACUGU - 36
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70