miRBase entry: ptr-mir-598

Stem-loop ptr-mir-598


Accession
MI0008804
Description
Pan troglodytes ptr-mir-598 precursor miRNA
Gene family
MIPF0000393; mir-598


Sequence

gcuugaugaugcugcugaugcuggcggugaucccgauggugugagcuggaaauggggugcUACGUCAUCGUUGUCAUCGUCAucaucaucauccga
....(((((......(((((.((((((((((..((((((((((.(((........)))..))))))))))..)))))))))).))))))))))...

Structure
gcuu     ugcugc     c          cc          -a   gga 
    gauga      ugaug uggcggugau  cgauggugug  gcu   a
    |||||      ||||| ||||||||||  ||||||||||  |||    
    cuacu      acuac ACUGCUACUG  GCUACUGCAU  ugg   a
-agc     ------     u          UU          cg   ggu 


Annotation confidence Not enough data
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Genome context
chr8: 10411361-10411456 [-]

Database links

Mature ptr-miR-598

Accession MIMAT0008267
Description Pan troglodytes ptr-miR-598 mature miRNA
Sequence 61 - UACGUCAUCGUUGUCAUCGUCA - 82
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70