miRBase entry: ptr-mir-600

Stem-loop ptr-mir-600


Accession
MI0008806
Description
Pan troglodytes ptr-mir-600 precursor miRNA
Gene family
MIPF0000484; mir-600


Sequence

aagucacgugcuguggcuccagcuucauaggaaggcucuugucugucaggcaguggaguuACUUACAGACAAGAGCCUUGCUCaggccagcccugcc
.........((.(.((((...((((...((.(((((((((((((((.((............)).))))))))))))))).)).)))).))))).)).

Structure
aagucacgu  u u    cca    cau  g               c  gcagu 
         gc g ggcu   gcuu   ag aaggcucuugucugu ag     g
         || | ||||   ||||   || ||||||||||||||| ||      
         cg c ccga   cgga   UC UUCCGAGAACAGACA UC     g
--------c  u -    --c    --C  G               U  Auuga 


Annotation confidence Not enough data
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Genome context
chr9: 101184807-101184903 [-]

Database links

Mature ptr-miR-600

Accession MIMAT0008269
Description Pan troglodytes ptr-miR-600 mature miRNA
Sequence 61 - ACUUACAGACAAGAGCCUUGCUC - 83
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70