miRBase entry: ptr-mir-609

Stem-loop ptr-mir-609


Accession
MI0008809
Description
Pan troglodytes ptr-mir-609 precursor miRNA
Gene family
MIPF0000516; mir-609


Sequence

ugcucggcuguuccuAGGGUGUUUCUCUCAUCUCUggucuauaauggguuaaauaguagagaugagggcaacacccuaggaacagcagaggaac
(.(((.(((((((((((((((((.((((((((((((..((((..........)))))))))))))))).))))))))))))))))).))).)..

Structure
-- g   g                 U            gu    aaug 
  u cuc gcuguuccuAGGGUGUU CUCUCAUCUCUg  cuau    g
  | ||| ||||||||||||||||| ||||||||||||  ||||     
  a gag cgacaaggaucccacaa gggaguagagau  gaua    g
ca g   a                 c            --    aauu 


Annotation confidence Not enough data
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Genome context
chr10: 105711432-105711525 [-]

Database links

Mature ptr-miR-609

Accession MIMAT0008272
Description Pan troglodytes ptr-miR-609 mature miRNA
Sequence 16 - AGGGUGUUUCUCUCAUCUCU - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70