miRBase entry: ptr-mir-613

Stem-loop ptr-mir-613


Accession
MI0008812
Description
Pan troglodytes ptr-mir-613 precursor miRNA
Gene family
MIPF0000590; mir-613


Sequence

ugagugcauuuccaagugugaagggacccuuccuguagugucuuauauacaauacaguAGGAAUGUUCCUUCUUUGCCacucauacaccuuua
((((((((...........(((((((((((..(((((.(((.......))).))))).)))...))))))))..)).))))))..........

Structure
----------      -  uuuccaagugu        ---   uc     g   cu 
          ugagug ca           gaagggac   ccu  cugua ugu  u
          |||||| ||           ||||||||   |||  ||||| |||  a
          acucaC GU           CUUCCUUG   GGA  gacau aca  u
auuuccacau      C  ---------UU        UAA   -u     a   ua 


Annotation confidence Not enough data
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Genome context
chr12: 13338299-13338391 [+]

Database links

Mature ptr-miR-613

Accession MIMAT0008275
Description Pan troglodytes ptr-miR-613 mature miRNA
Sequence 59 - AGGAAUGUUCCUUCUUUGCC - 78
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70