miRBase entry: ptr-mir-616

Stem-loop ptr-mir-616


Accession
MI0008815
Description
Pan troglodytes ptr-mir-616 precursor miRNA
Gene family
MIPF0000507; mir-616


Sequence

uagguaauuccuccacucaaaacccuccagugacuuccaugacaugaaacaggaAGUCAUUGGAGGGUUUGAGCAGaggaaugaccuguuuuaaaa
(((((.(((((((..((((((.((((((((((((((((.((........))))))))))))))))))))))))..))))))).)))))........

Structure
--------     a       ca      a                a  aca 
        uaggu auuccuc  cucaaa cccuccagugacuucc ug   u
        ||||| |||||||  |||||| |||||||||||||||| ||    
        gucca uaaggaG  GAGUUU GGGAGGUUACUGAagg ac   g
aaaauuuu     g       AC      -                -  aaa 


Annotation confidence Not enough data
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Genome context
chr12: 32297798-32297893 [+]

Database links

Mature ptr-miR-616

Accession MIMAT0008278
Description Pan troglodytes ptr-miR-616 mature miRNA
Sequence 55 - AGUCAUUGGAGGGUUUGAGCAG - 76
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70